eSOL(Solubility database of all E.coli proteins)は、再構築型の試験管内タンパク質合成系を用いて、大腸菌の全てのタンパク質を発現させた際の凝集の度合い(可溶率)と合成量をまとめたデータベースです。
遺伝子名一覧検索
結果
gene name: ydbK
hit: 1
JW_ID |
Gene name K-12 |
Solubility(%) |
Calculated MW(kDa) |
Gene product description |
JW1372 |
ydbK |
17 |
128.677 |
fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase |
JW_ID |
Gene name K-12 |
Solubility(%) |
Yield(uM) |
Calculated MW(kDa) |
Calculated pI |
Gene product description |
Cell location |
JW1372 |
ydbK |
17 |
- |
128.677 |
5.67 |
fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase |
Cytoplasmic |
JW_ID |
Gene name K-12 |
Solubility(%) |
Calculated MW(kDa) |
Type of gene product |
Gene product description |
Structure (PDB) id |
SCOP assignment |
JW1372 |
ydbK |
17 |
128.677 |
pc |
fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase |
- |
52518; Thiamin diphosphate-binding fold (THDP-binding) 52922; Transketolase C-terminal domain-like 53323; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 54862; 4Fe-4S ferredoxins 52518; Thiamin diphosphate-binding fold |
JW_ID |
Gene name K-12 |
Solubility(%) |
Minus Sol |
TF Sol |
GroE Sol |
KJE Sol |
Minus(uM) |
TF(uM) |
GroE(uM) |
KJE(uM) |
Calculated MW(kDa) |
Gene product description |
JW1372 |
ydbK |
17 |
22.78 |
43.48 |
9.93 |
61.21 |
0.09 |
0.09 |
0.127 |
0.134 |
128.677 |
fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase |
JW_ID |
Gene name K-12 |
Solubility(%) |
Yield(uM) |
Minus Sol |
TF Sol |
GroE Sol |
KJE Sol |
Minus(uM) |
TF(uM) |
GroE(uM) |
KJE(uM) |
Calculated MW(kDa) |
Calculated pI |
Type of gene product |
Gene product description |
Cell location |
Structure (PDB) id |
SCOP assignment |
JW1372 |
ydbK |
17 |
- |
22.78 |
43.48 |
9.93 |
61.21 |
0.09 |
0.09 |
0.127 |
0.134 |
128.677 |
5.67 |
pc |
fused predicted Fe-S subunit of pyruvate-flavodoxin oxidoreductase |
Cytoplasmic |
- |
52518; Thiamin diphosphate-binding fold (THDP-binding) 52922; Transketolase C-terminal domain-like 53323; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 54862; 4Fe-4S ferredoxins 52518; Thiamin diphosphate-binding fold |